Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Gm21362-201ENSMUST00000194272 928 ntBASIC18.94■□□□□ 0.62
Pde6aP27664 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pde6aP27664 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.94■□□□□ 0.62
Pde6aP27664 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.93■□□□□ 0.62
Pde6aP27664 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pde6aP27664 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pde6aP27664 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.93■□□□□ 0.62
Pde6aP27664 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pde6aP27664 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Pde6aP27664 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6aP27664 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6aP27664 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pde6aP27664 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6aP27664 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Pde6aP27664 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6aP27664 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6aP27664 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6aP27664 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6aP27664 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.92■□□□□ 0.62
Pde6aP27664 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6aP27664 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pde6aP27664 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pde6aP27664 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6aP27664 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6aP27664 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pde6aP27664 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.91■□□□□ 0.62
Pde6aP27664 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pde6aP27664 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6aP27664 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pde6aP27664 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.91■□□□□ 0.62
Pde6aP27664 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.91■□□□□ 0.62
Pde6aP27664 Gm27357-201ENSMUST00000183754 135 ntBASIC18.91■□□□□ 0.62
Pde6aP27664 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6aP27664 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6aP27664 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6aP27664 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6aP27664 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6aP27664 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pde6aP27664 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pde6aP27664 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pde6aP27664 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.9■□□□□ 0.62
Pde6aP27664 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.9■□□□□ 0.62
Pde6aP27664 Ank2-226ENSMUST00000189368 339 ntBASIC18.9■□□□□ 0.62
Pde6aP27664 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pde6aP27664 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.9■□□□□ 0.62
Pde6aP27664 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.9■□□□□ 0.62
Pde6aP27664 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pde6aP27664 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.9■□□□□ 0.62
Pde6aP27664 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Pde6aP27664 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pde6aP27664 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pde6aP27664 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pde6aP27664 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pde6aP27664 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pde6aP27664 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Pde6aP27664 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Pde6aP27664 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pde6aP27664 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pde6aP27664 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.89■□□□□ 0.61
Pde6aP27664 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6aP27664 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.89■□□□□ 0.61
Pde6aP27664 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6aP27664 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pde6aP27664 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6aP27664 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6aP27664 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6aP27664 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pde6aP27664 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms