Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40P27512 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40P27512 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40P27512 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40P27512 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40P27512 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40P27512 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40P27512 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cd40P27512 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40P27512 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40P27512 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40P27512 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40P27512 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Cd40P27512 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40P27512 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cd40P27512 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.77□□□□□ -0.04
Cd40P27512 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40P27512 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cd40P27512 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Cd40P27512 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.77□□□□□ -0.05
Cd40P27512 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cd40P27512 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cd40P27512 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.77□□□□□ -0.05
Cd40P27512 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cd40P27512 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.76□□□□□ -0.05
Cd40P27512 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.76□□□□□ -0.05
Cd40P27512 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Cd40P27512 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.76□□□□□ -0.05
Cd40P27512 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.76□□□□□ -0.05
Cd40P27512 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.76□□□□□ -0.05
Cd40P27512 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cd40P27512 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cd40P27512 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.76□□□□□ -0.05
Cd40P27512 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cd40P27512 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
Cd40P27512 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cd40P27512 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Cd40P27512 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Cd40P27512 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cd40P27512 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Cd40P27512 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cd40P27512 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cd40P27512 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.75□□□□□ -0.05
Cd40P27512 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cd40P27512 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Cd40P27512 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cd40P27512 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms