Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Nfkb1P25799 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nfkb1P25799 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Nfkb1P25799 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nfkb1P25799 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.76■□□□□ 0.27
Nfkb1P25799 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.76■□□□□ 0.27
Nfkb1P25799 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nfkb1P25799 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nfkb1P25799 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nfkb1P25799 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nfkb1P25799 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nfkb1P25799 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nfkb1P25799 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nfkb1P25799 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nfkb1P25799 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nfkb1P25799 Gm15165-201ENSMUST00000118140 502 ntBASIC16.75■□□□□ 0.27
Nfkb1P25799 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nfkb1P25799 Gm44454-201ENSMUST00000198541 138 ntBASIC16.75■□□□□ 0.27
Nfkb1P25799 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nfkb1P25799 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nfkb1P25799 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nfkb1P25799 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Nfkb1P25799 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nfkb1P25799 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nfkb1P25799 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.74■□□□□ 0.27
Nfkb1P25799 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.74■□□□□ 0.27
Nfkb1P25799 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Nfkb1P25799 Gm11452-201ENSMUST00000122376 690 ntBASIC16.74■□□□□ 0.27
Nfkb1P25799 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nfkb1P25799 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Nfkb1P25799 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.74■□□□□ 0.27
Nfkb1P25799 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.74■□□□□ 0.27
Nfkb1P25799 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nfkb1P25799 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.74■□□□□ 0.27
Nfkb1P25799 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.74■□□□□ 0.27
Nfkb1P25799 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Nfkb1P25799 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nfkb1P25799 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nfkb1P25799 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nfkb1P25799 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.73■□□□□ 0.27
Nfkb1P25799 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.73■□□□□ 0.27
Nfkb1P25799 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.73■□□□□ 0.27
Nfkb1P25799 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.73■□□□□ 0.27
Nfkb1P25799 Gm44771-201ENSMUST00000206975 626 ntBASIC16.73■□□□□ 0.27
Nfkb1P25799 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.73■□□□□ 0.27
Nfkb1P25799 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Nfkb1P25799 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.73■□□□□ 0.27
Nfkb1P25799 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nfkb1P25799 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.72■□□□□ 0.27
Nfkb1P25799 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nfkb1P25799 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.72■□□□□ 0.27
Nfkb1P25799 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nfkb1P25799 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nfkb1P25799 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nfkb1P25799 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Nfkb1P25799 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.72■□□□□ 0.27
Nfkb1P25799 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.72■□□□□ 0.27
Nfkb1P25799 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.72■□□□□ 0.27
Nfkb1P25799 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nfkb1P25799 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.71■□□□□ 0.27
Nfkb1P25799 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nfkb1P25799 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms