Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pde6bP23440 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6bP23440 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6bP23440 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6bP23440 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6bP23440 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6bP23440 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pde6bP23440 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.77■□□□□ 0.44
Pde6bP23440 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6bP23440 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6bP23440 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.77■□□□□ 0.44
Pde6bP23440 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.77■□□□□ 0.44
Pde6bP23440 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6bP23440 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pde6bP23440 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pde6bP23440 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pde6bP23440 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Pde6bP23440 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.76■□□□□ 0.43
Pde6bP23440 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.76■□□□□ 0.43
Pde6bP23440 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pde6bP23440 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 Rps4l-201ENSMUST00000071745 943 ntBASIC17.76■□□□□ 0.43
Pde6bP23440 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6bP23440 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.76■□□□□ 0.43
Pde6bP23440 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pde6bP23440 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pde6bP23440 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.75■□□□□ 0.43
Pde6bP23440 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pde6bP23440 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.75■□□□□ 0.43
Pde6bP23440 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.75■□□□□ 0.43
Pde6bP23440 Gm44454-201ENSMUST00000198541 138 ntBASIC17.75■□□□□ 0.43
Pde6bP23440 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.75■□□□□ 0.43
Pde6bP23440 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pde6bP23440 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.75■□□□□ 0.43
Pde6bP23440 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pde6bP23440 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6bP23440 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.74■□□□□ 0.43
Pde6bP23440 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Pde6bP23440 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.74■□□□□ 0.43
Pde6bP23440 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.74■□□□□ 0.43
Pde6bP23440 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pde6bP23440 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.74■□□□□ 0.43
Pde6bP23440 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.74■□□□□ 0.43
Pde6bP23440 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.74■□□□□ 0.43
Pde6bP23440 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6bP23440 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.73■□□□□ 0.43
Pde6bP23440 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Pde6bP23440 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6bP23440 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.73■□□□□ 0.43
Pde6bP23440 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6bP23440 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pde6bP23440 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.73■□□□□ 0.43
Pde6bP23440 Gm15165-201ENSMUST00000118140 502 ntBASIC17.73■□□□□ 0.43
Pde6bP23440 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6bP23440 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms