Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Ccl1P10146 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Ccl1P10146 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
Ccl1P10146 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccl1P10146 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccl1P10146 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ccl1P10146 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccl1P10146 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccl1P10146 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccl1P10146 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Ccl1P10146 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccl1P10146 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Ccl1P10146 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Ccl1P10146 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccl1P10146 Mir6349-201ENSMUST00000184059 97 ntBASIC12.73□□□□□ -0.37
Ccl1P10146 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.73□□□□□ -0.37
Ccl1P10146 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.73□□□□□ -0.37
Ccl1P10146 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccl1P10146 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.73□□□□□ -0.37
Ccl1P10146 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccl1P10146 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccl1P10146 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccl1P10146 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Ccl1P10146 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccl1P10146 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.72□□□□□ -0.37
Ccl1P10146 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Ccl1P10146 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ccl1P10146 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccl1P10146 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccl1P10146 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccl1P10146 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccl1P10146 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl1P10146 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccl1P10146 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccl1P10146 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccl1P10146 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccl1P10146 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccl1P10146 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccl1P10146 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl1P10146 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ccl1P10146 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms