Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Calm3P0DP28 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.82■□□□□ 0.6
Calm3P0DP28 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.82■□□□□ 0.6
Calm3P0DP28 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Calm3P0DP28 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Calm3P0DP28 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Gm7367-201ENSMUST00000057611 492 ntBASIC18.82■□□□□ 0.6
Calm3P0DP28 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Calm3P0DP28 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Calm3P0DP28 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Calm3P0DP28 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.81■□□□□ 0.6
Calm3P0DP28 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Calm3P0DP28 Gm21362-201ENSMUST00000194272 928 ntBASIC18.81■□□□□ 0.6
Calm3P0DP28 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.81■□□□□ 0.6
Calm3P0DP28 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.81■□□□□ 0.6
Calm3P0DP28 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Calm3P0DP28 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.8■□□□□ 0.6
Calm3P0DP28 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.8■□□□□ 0.6
Calm3P0DP28 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.8■□□□□ 0.6
Calm3P0DP28 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Calm3P0DP28 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Calm3P0DP28 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Calm3P0DP28 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Gm13312-201ENSMUST00000119631 718 ntBASIC18.79■□□□□ 0.6
Calm3P0DP28 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Gm27357-201ENSMUST00000183754 135 ntBASIC18.79■□□□□ 0.6
Calm3P0DP28 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.79■□□□□ 0.6
Calm3P0DP28 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Calm3P0DP28 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Calm3P0DP28 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Calm3P0DP28 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Calm3P0DP28 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.78■□□□□ 0.6
Calm3P0DP28 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Calm3P0DP28 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Calm3P0DP28 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Calm3P0DP28 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.78■□□□□ 0.6
Calm3P0DP28 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Calm3P0DP28 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.78■□□□□ 0.6
Calm3P0DP28 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.78■□□□□ 0.6
Calm3P0DP28 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Calm3P0DP28 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Calm3P0DP28 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Calm3P0DP28 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Calm3P0DP28 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Calm3P0DP28 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Calm3P0DP28 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.77■□□□□ 0.6
Calm3P0DP28 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Calm3P0DP28 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Calm3P0DP28 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Calm3P0DP28 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Calm3P0DP28 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Calm3P0DP28 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Calm3P0DP28 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Calm3P0DP28 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Calm3P0DP28 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms