Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.23□□□□□ -0.13
UbbP0CG49 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
UbbP0CG49 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.23□□□□□ -0.13
UbbP0CG49 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.23□□□□□ -0.13
UbbP0CG49 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UbbP0CG49 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UbbP0CG49 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.23□□□□□ -0.13
UbbP0CG49 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UbbP0CG49 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UbbP0CG49 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
UbbP0CG49 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
UbbP0CG49 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
UbbP0CG49 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.22□□□□□ -0.13
UbbP0CG49 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.22□□□□□ -0.13
UbbP0CG49 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Gm37856-201ENSMUST00000191634 999 ntBASIC14.22□□□□□ -0.13
UbbP0CG49 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
UbbP0CG49 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UbbP0CG49 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UbbP0CG49 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UbbP0CG49 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UbbP0CG49 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
UbbP0CG49 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
UbbP0CG49 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UbbP0CG49 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
UbbP0CG49 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UbbP0CG49 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
UbbP0CG49 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UbbP0CG49 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
UbbP0CG49 Gm38027-201ENSMUST00000192315 235 ntBASIC14.21□□□□□ -0.13
UbbP0CG49 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
UbbP0CG49 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UbbP0CG49 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UbbP0CG49 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.21□□□□□ -0.13
UbbP0CG49 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
UbbP0CG49 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
UbbP0CG49 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.21□□□□□ -0.14
UbbP0CG49 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UbbP0CG49 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UbbP0CG49 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
UbbP0CG49 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Gm5643-201ENSMUST00000117081 966 ntBASIC14.2□□□□□ -0.14
UbbP0CG49 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.2□□□□□ -0.14
UbbP0CG49 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UbbP0CG49 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UbbP0CG49 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UbbP0CG49 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UbbP0CG49 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.2□□□□□ -0.14
UbbP0CG49 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UbbP0CG49 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UbbP0CG49 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.19□□□□□ -0.14
UbbP0CG49 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UbbP0CG49 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
UbbP0CG49 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.19□□□□□ -0.14
UbbP0CG49 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.19□□□□□ -0.14
UbbP0CG49 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UbbP0CG49 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms