Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxc9P09633 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.12■□□□□ 0.97
Hoxc9P09633 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.12■□□□□ 0.97
Hoxc9P09633 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc9P09633 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc9P09633 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc9P09633 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc9P09633 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC21.11■□□□□ 0.97
Hoxc9P09633 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC21.11■□□□□ 0.97
Hoxc9P09633 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc9P09633 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc9P09633 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hoxc9P09633 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC21.11■□□□□ 0.97
Hoxc9P09633 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc9P09633 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc9P09633 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Hoxc9P09633 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc9P09633 Gm23935-201ENSMUST00000102303 57 ntBASIC21.1■□□□□ 0.97
Hoxc9P09633 Gm24270-201ENSMUST00000102326 57 ntBASIC21.1■□□□□ 0.97
Hoxc9P09633 Gm24245-201ENSMUST00000157318 57 ntBASIC21.1■□□□□ 0.97
Hoxc9P09633 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21.1■□□□□ 0.97
Hoxc9P09633 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Hoxc9P09633 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc9P09633 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Hoxc9P09633 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc9P09633 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc9P09633 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC21.1■□□□□ 0.97
Hoxc9P09633 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc9P09633 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc9P09633 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxc9P09633 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxc9P09633 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxc9P09633 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm6736-201ENSMUST00000166583 948 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm8825-201ENSMUST00000182565 998 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm4518-201ENSMUST00000182638 718 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21.09■□□□□ 0.97
Hoxc9P09633 AC117588.1-201ENSMUST00000228510 999 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm10175-201ENSMUST00000086013 645 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Hoxc9P09633 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxc9P09633 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Hoxc9P09633 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.09■□□□□ 0.97
Hoxc9P09633 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Hoxc9P09633 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxc9P09633 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Hoxc9P09633 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Hoxc9P09633 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hoxc9P09633 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Hoxc9P09633 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC21.08■□□□□ 0.97
Hoxc9P09633 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC21.08■□□□□ 0.97
Hoxc9P09633 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Hoxc9P09633 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hoxc9P09633 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hoxc9P09633 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.07■□□□□ 0.96
Hoxc9P09633 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Hoxc9P09633 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Hoxc9P09633 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC21.07■□□□□ 0.96
Hoxc9P09633 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC21.07■□□□□ 0.96
Hoxc9P09633 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Gm25911-201ENSMUST00000157621 56 ntBASIC21.07■□□□□ 0.96
Hoxc9P09633 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC21.07■□□□□ 0.96
Hoxc9P09633 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC21.07■□□□□ 0.96
Hoxc9P09633 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC21.07■□□□□ 0.96
Hoxc9P09633 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC21.07■□□□□ 0.96
Hoxc9P09633 AC225888.1-201ENSMUST00000227184 728 ntBASIC21.07■□□□□ 0.96
Hoxc9P09633 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC21.07■□□□□ 0.96
Hoxc9P09633 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Hoxc9P09633 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Hoxc9P09633 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hoxc9P09633 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms