Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hoxc8P09025 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Hoxc8P09025 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hoxc8P09025 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Hoxc8P09025 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hoxc8P09025 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc8P09025 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc8P09025 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc8P09025 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Hoxc8P09025 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc8P09025 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.36■□□□□ 0.37
Hoxc8P09025 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.36■□□□□ 0.37
Hoxc8P09025 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Hoxc8P09025 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc8P09025 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc8P09025 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hoxc8P09025 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hoxc8P09025 Gm23935-201ENSMUST00000102303 57 ntBASIC17.35■□□□□ 0.37
Hoxc8P09025 Gm24270-201ENSMUST00000102326 57 ntBASIC17.35■□□□□ 0.37
Hoxc8P09025 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.35■□□□□ 0.37
Hoxc8P09025 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.35■□□□□ 0.37
Hoxc8P09025 Gm24245-201ENSMUST00000157318 57 ntBASIC17.35■□□□□ 0.37
Hoxc8P09025 Gm25911-201ENSMUST00000157621 56 ntBASIC17.35■□□□□ 0.37
Hoxc8P09025 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.35■□□□□ 0.37
Hoxc8P09025 Gm43575-201ENSMUST00000196420 516 ntBASIC17.35■□□□□ 0.37
Hoxc8P09025 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.35■□□□□ 0.37
Hoxc8P09025 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.35■□□□□ 0.37
Hoxc8P09025 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc8P09025 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Hoxc8P09025 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.34■□□□□ 0.37
Hoxc8P09025 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.34■□□□□ 0.37
Hoxc8P09025 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.34■□□□□ 0.37
Hoxc8P09025 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.34■□□□□ 0.37
Hoxc8P09025 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hoxc8P09025 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc8P09025 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Hoxc8P09025 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.33■□□□□ 0.37
Hoxc8P09025 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Hoxc8P09025 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.33■□□□□ 0.37
Hoxc8P09025 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc8P09025 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc8P09025 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.33■□□□□ 0.37
Hoxc8P09025 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.33■□□□□ 0.36
Hoxc8P09025 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.33■□□□□ 0.36
Hoxc8P09025 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxc8P09025 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.33■□□□□ 0.36
Hoxc8P09025 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Gm6736-201ENSMUST00000166583 948 ntBASIC17.33■□□□□ 0.36
Hoxc8P09025 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Hoxc8P09025 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Hoxc8P09025 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.33■□□□□ 0.36
Hoxc8P09025 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Hoxc8P09025 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hoxc8P09025 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.32■□□□□ 0.36
Hoxc8P09025 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hoxc8P09025 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms