Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
P06328 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.97□□□□□ -0.49
P06328 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.97□□□□□ -0.49
P06328 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
P06328 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.96□□□□□ -0.49
P06328 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.96□□□□□ -0.49
P06328 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.96□□□□□ -0.49
P06328 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
P06328 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
P06328 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.96□□□□□ -0.49
P06328 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.96□□□□□ -0.49
P06328 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.96□□□□□ -0.49
P06328 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.96□□□□□ -0.49
P06328 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.96□□□□□ -0.49
P06328 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
P06328 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.96□□□□□ -0.5
P06328 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06328 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06328 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06328 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06328 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
P06328 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
P06328 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.96□□□□□ -0.5
P06328 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
P06328 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.95□□□□□ -0.5
P06328 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
P06328 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Mir5122-201ENSMUST00000175004 89 ntBASIC11.95□□□□□ -0.5
P06328 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.95□□□□□ -0.5
P06328 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.95□□□□□ -0.5
P06328 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
P06328 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
P06328 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.95□□□□□ -0.5
P06328 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.94□□□□□ -0.5
P06328 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
P06328 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.94□□□□□ -0.5
P06328 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
P06328 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
P06328 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
P06328 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.94□□□□□ -0.5
P06328 Gm18115-201ENSMUST00000221209 621 ntBASIC11.94□□□□□ -0.5
P06328 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
P06328 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.94□□□□□ -0.5
P06328 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.94□□□□□ -0.5
P06328 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms