Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm27300-201ENSMUST00000184085 97 ntBASIC19.98■□□□□ 0.79
Col4a1P02463 Gm27335-201ENSMUST00000184758 97 ntBASIC19.98■□□□□ 0.79
Col4a1P02463 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a1P02463 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a1P02463 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Col4a1P02463 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a1P02463 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Col4a1P02463 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a1P02463 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a1P02463 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Col4a1P02463 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a1P02463 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a1P02463 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a1P02463 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col4a1P02463 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.97■□□□□ 0.79
Col4a1P02463 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.97■□□□□ 0.79
Col4a1P02463 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.97■□□□□ 0.79
Col4a1P02463 Gm2213-201ENSMUST00000197485 688 ntBASIC19.97■□□□□ 0.79
Col4a1P02463 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.97■□□□□ 0.79
Col4a1P02463 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.97■□□□□ 0.79
Col4a1P02463 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.97■□□□□ 0.79
Col4a1P02463 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.97■□□□□ 0.79
Col4a1P02463 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.97■□□□□ 0.79
Col4a1P02463 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 Gm11764-201ENSMUST00000120221 623 ntBASIC19.97■□□□□ 0.79
Col4a1P02463 Gm24513-201ENSMUST00000174964 138 ntBASIC19.97■□□□□ 0.79
Col4a1P02463 Gm17968-201ENSMUST00000194902 784 ntBASIC19.97■□□□□ 0.79
Col4a1P02463 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.97■□□□□ 0.79
Col4a1P02463 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a1P02463 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a1P02463 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a1P02463 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a1P02463 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a1P02463 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a1P02463 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a1P02463 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Col4a1P02463 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Col4a1P02463 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a1P02463 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.96■□□□□ 0.79
Col4a1P02463 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.95■□□□□ 0.78
Col4a1P02463 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a1P02463 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
Col4a1P02463 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a1P02463 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a1P02463 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a1P02463 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a1P02463 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a1P02463 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a1P02463 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a1P02463 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a1P02463 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Col4a1P02463 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a1P02463 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Col4a1P02463 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a1P02463 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.94■□□□□ 0.78
Col4a1P02463 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm6736-201ENSMUST00000166583 948 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.94■□□□□ 0.78
Col4a1P02463 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm8825-201ENSMUST00000182565 998 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm4518-201ENSMUST00000182638 718 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.94■□□□□ 0.78
Col4a1P02463 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.94■□□□□ 0.78
Col4a1P02463 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a1P02463 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a1P02463 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a1P02463 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a1P02463 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a1P02463 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.94■□□□□ 0.78
Col4a1P02463 Gm27397-201ENSMUST00000184997 107 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Gm45167-201ENSMUST00000208007 322 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a1P02463 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.94■□□□□ 0.78
Col4a1P02463 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a1P02463 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a1P02463 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a1P02463 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms