Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3f3cP02301 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
H3f3cP02301 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
H3f3cP02301 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3cP02301 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
H3f3cP02301 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3cP02301 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.02□□□□□ -0.16
H3f3cP02301 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.02□□□□□ -0.16
H3f3cP02301 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3cP02301 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3f3cP02301 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
H3f3cP02301 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.02□□□□□ -0.16
H3f3cP02301 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.02□□□□□ -0.16
H3f3cP02301 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.02□□□□□ -0.16
H3f3cP02301 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
H3f3cP02301 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3cP02301 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.02□□□□□ -0.17
H3f3cP02301 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3cP02301 Gm37722-201ENSMUST00000193757 208 ntBASIC14.02□□□□□ -0.17
H3f3cP02301 Gm29707-201ENSMUST00000196325 491 ntBASIC14.02□□□□□ -0.17
H3f3cP02301 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3cP02301 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3cP02301 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3cP02301 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3cP02301 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
H3f3cP02301 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H3f3cP02301 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.02□□□□□ -0.17
H3f3cP02301 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3cP02301 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.02□□□□□ -0.17
H3f3cP02301 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3cP02301 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3cP02301 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3cP02301 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
H3f3cP02301 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Gm23634-201ENSMUST00000175071 91 ntBASIC14.01□□□□□ -0.17
H3f3cP02301 Gm5587-201ENSMUST00000206270 674 ntBASIC14.01□□□□□ -0.17
H3f3cP02301 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.01□□□□□ -0.17
H3f3cP02301 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H3f3cP02301 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3cP02301 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Gfra2-202ENSMUST00000227633 1480 ntBASIC14□□□□□ -0.17
H3f3cP02301 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Gm7977-201ENSMUST00000193787 748 ntBASIC14□□□□□ -0.17
H3f3cP02301 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3f3cP02301 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14□□□□□ -0.17
H3f3cP02301 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14□□□□□ -0.17
H3f3cP02301 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3cP02301 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3cP02301 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms