Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.97□□□□□ -0.49
TcraP01849 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
TcraP01849 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Mir5133-201ENSMUST00000174955 77 ntBASIC11.97□□□□□ -0.49
TcraP01849 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
TcraP01849 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
TcraP01849 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TcraP01849 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
TcraP01849 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.97□□□□□ -0.49
TcraP01849 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TcraP01849 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.97□□□□□ -0.49
TcraP01849 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TcraP01849 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TcraP01849 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TcraP01849 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.96□□□□□ -0.49
TcraP01849 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.96□□□□□ -0.49
TcraP01849 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.96□□□□□ -0.49
TcraP01849 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Gm27405-201ENSMUST00000184201 112 ntBASIC11.96□□□□□ -0.49
TcraP01849 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TcraP01849 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.96□□□□□ -0.49
TcraP01849 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.96□□□□□ -0.49
TcraP01849 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TcraP01849 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TcraP01849 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
TcraP01849 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
TcraP01849 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
TcraP01849 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TcraP01849 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
TcraP01849 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
TcraP01849 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TcraP01849 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
TcraP01849 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TcraP01849 Gm7291-201ENSMUST00000199147 382 ntBASIC11.95□□□□□ -0.5
TcraP01849 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TcraP01849 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TcraP01849 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
TcraP01849 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.94□□□□□ -0.5
TcraP01849 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TcraP01849 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
TcraP01849 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TcraP01849 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms