Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.94□□□□□ -0.34
P01643 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.94□□□□□ -0.34
P01643 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
P01643 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.94□□□□□ -0.34
P01643 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.94□□□□□ -0.34
P01643 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.94□□□□□ -0.34
P01643 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.94□□□□□ -0.34
P01643 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
P01643 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P01643 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P01643 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.94□□□□□ -0.34
P01643 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
P01643 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P01643 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
P01643 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
P01643 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
P01643 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
P01643 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
P01643 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
P01643 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.93□□□□□ -0.34
P01643 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
P01643 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
P01643 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
P01643 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.93□□□□□ -0.34
P01643 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Rps4l-201ENSMUST00000071745 943 ntBASIC12.93□□□□□ -0.34
P01643 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.93□□□□□ -0.34
P01643 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
P01643 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
P01643 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P01643 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.93□□□□□ -0.34
P01643 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
P01643 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
P01643 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
P01643 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
P01643 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.92□□□□□ -0.34
P01643 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Gm25745-201ENSMUST00000174945 133 ntBASIC12.92□□□□□ -0.34
P01643 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Gm36967-201ENSMUST00000193814 266 ntBASIC12.92□□□□□ -0.34
P01643 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.92□□□□□ -0.34
P01643 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
P01643 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.92□□□□□ -0.34
P01643 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
P01643 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
P01643 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
P01643 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
P01643 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms