Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.77■□□□□ 0.6
Becn1O88597 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Becn1O88597 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Becn1O88597 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Becn1O88597 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Becn1O88597 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Becn1O88597 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Becn1O88597 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Becn1O88597 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Becn1O88597 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Becn1O88597 Gm27275-201ENSMUST00000184318 272 ntBASIC18.76■□□□□ 0.59
Becn1O88597 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.76■□□□□ 0.59
Becn1O88597 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Becn1O88597 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.76■□□□□ 0.59
Becn1O88597 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Becn1O88597 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Becn1O88597 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Becn1O88597 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Becn1O88597 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Becn1O88597 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Becn1O88597 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Becn1O88597 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Becn1O88597 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Becn1O88597 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Becn1O88597 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Becn1O88597 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.75■□□□□ 0.59
Becn1O88597 Gm10418-201ENSMUST00000100943 576 ntBASIC18.75■□□□□ 0.59
Becn1O88597 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Becn1O88597 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.75■□□□□ 0.59
Becn1O88597 Gm20760-201ENSMUST00000179197 648 ntBASIC18.75■□□□□ 0.59
Becn1O88597 Trmt13-210ENSMUST00000198454 880 ntBASIC18.75■□□□□ 0.59
Becn1O88597 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.75■□□□□ 0.59
Becn1O88597 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Becn1O88597 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Becn1O88597 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Becn1O88597 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Becn1O88597 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Becn1O88597 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Becn1O88597 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Becn1O88597 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Becn1O88597 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.74■□□□□ 0.59
Becn1O88597 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Becn1O88597 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Becn1O88597 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Becn1O88597 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Becn1O88597 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Becn1O88597 Flg-201ENSMUST00000050758 1488 ntBASIC18.73■□□□□ 0.59
Becn1O88597 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.73■□□□□ 0.59
Becn1O88597 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.73■□□□□ 0.59
Becn1O88597 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Becn1O88597 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Becn1O88597 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Becn1O88597 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Becn1O88597 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Becn1O88597 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Becn1O88597 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Becn1O88597 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Becn1O88597 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Becn1O88597 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Becn1O88597 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Becn1O88597 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Becn1O88597 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Becn1O88597 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Becn1O88597 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Becn1O88597 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Becn1O88597 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Becn1O88597 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms