Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.98□□□□□ -0.17
Cldn1O88551 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.98□□□□□ -0.17
Cldn1O88551 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Cldn1O88551 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cldn1O88551 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.97□□□□□ -0.17
Cldn1O88551 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.97□□□□□ -0.17
Cldn1O88551 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.97□□□□□ -0.17
Cldn1O88551 Gm13312-201ENSMUST00000119631 718 ntBASIC13.97□□□□□ -0.17
Cldn1O88551 Gm6736-201ENSMUST00000166583 948 ntBASIC13.97□□□□□ -0.17
Cldn1O88551 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.97□□□□□ -0.17
Cldn1O88551 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cldn1O88551 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.97□□□□□ -0.17
Cldn1O88551 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cldn1O88551 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
Cldn1O88551 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.96□□□□□ -0.17
Cldn1O88551 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cldn1O88551 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.96□□□□□ -0.17
Cldn1O88551 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cldn1O88551 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Cldn1O88551 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.96□□□□□ -0.17
Cldn1O88551 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.96□□□□□ -0.17
Cldn1O88551 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
Cldn1O88551 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Cldn1O88551 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Cldn1O88551 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cldn1O88551 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Cldn1O88551 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cldn1O88551 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.96□□□□□ -0.18
Cldn1O88551 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cldn1O88551 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cldn1O88551 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.96□□□□□ -0.18
Cldn1O88551 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cldn1O88551 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.95□□□□□ -0.18
Cldn1O88551 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.95□□□□□ -0.18
Cldn1O88551 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cldn1O88551 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.95□□□□□ -0.18
Cldn1O88551 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Mir5126-201ENSMUST00000175513 77 ntBASIC13.95□□□□□ -0.18
Cldn1O88551 Gm7063-201ENSMUST00000186840 981 ntBASIC13.95□□□□□ -0.18
Cldn1O88551 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.95□□□□□ -0.18
Cldn1O88551 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.95□□□□□ -0.18
Cldn1O88551 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.95□□□□□ -0.18
Cldn1O88551 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cldn1O88551 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cldn1O88551 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.94□□□□□ -0.18
Cldn1O88551 Gm15165-201ENSMUST00000118140 502 ntBASIC13.94□□□□□ -0.18
Cldn1O88551 Gm15467-201ENSMUST00000120582 445 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms