Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.9■□□□□ 0.78
Cops6O88545 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.9■□□□□ 0.78
Cops6O88545 Gm6089-201ENSMUST00000197666 938 ntBASIC19.9■□□□□ 0.78
Cops6O88545 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.9■□□□□ 0.78
Cops6O88545 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.9■□□□□ 0.78
Cops6O88545 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cops6O88545 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cops6O88545 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cops6O88545 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.89■□□□□ 0.77
Cops6O88545 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cops6O88545 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cops6O88545 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cops6O88545 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.89■□□□□ 0.77
Cops6O88545 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cops6O88545 Mir6404-201ENSMUST00000183699 94 ntBASIC19.89■□□□□ 0.77
Cops6O88545 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.89■□□□□ 0.77
Cops6O88545 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cops6O88545 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cops6O88545 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cops6O88545 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cops6O88545 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cops6O88545 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.88■□□□□ 0.77
Cops6O88545 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.88■□□□□ 0.77
Cops6O88545 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Gm5364-201ENSMUST00000216789 889 ntBASIC19.88■□□□□ 0.77
Cops6O88545 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.88■□□□□ 0.77
Cops6O88545 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cops6O88545 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.88■□□□□ 0.77
Cops6O88545 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cops6O88545 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Cops6O88545 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.87■□□□□ 0.77
Cops6O88545 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.87■□□□□ 0.77
Cops6O88545 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.87■□□□□ 0.77
Cops6O88545 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cops6O88545 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops6O88545 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.86■□□□□ 0.77
Cops6O88545 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cops6O88545 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cops6O88545 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Cops6O88545 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.86■□□□□ 0.77
Cops6O88545 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.86■□□□□ 0.77
Cops6O88545 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.86■□□□□ 0.77
Cops6O88545 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.86■□□□□ 0.77
Cops6O88545 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.86■□□□□ 0.77
Cops6O88545 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops6O88545 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.85■□□□□ 0.77
Cops6O88545 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops6O88545 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms