Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tnfrsf17O88472 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Gm9172-201ENSMUST00000212092 954 ntBASIC15.13■□□□□ 0.01
Tnfrsf17O88472 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.13■□□□□ 0.01
Tnfrsf17O88472 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.13■□□□□ 0.01
Tnfrsf17O88472 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Mir1895-201ENSMUST00000122615 79 ntBASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Gm27494-201ENSMUST00000184735 189 ntBASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tnfrsf17O88472 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Gm5312-201ENSMUST00000203728 547 ntBASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf17O88472 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf17O88472 Gm5682-201ENSMUST00000173402 505 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms