Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 AC093926.2-201ENSMUST00000214468 1228 ntBASIC21.16■□□□□ 0.98
Nid2O88322 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nid2O88322 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC21.16■□□□□ 0.98
Nid2O88322 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nid2O88322 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nid2O88322 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nid2O88322 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nid2O88322 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.16■□□□□ 0.98
Nid2O88322 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Nid2O88322 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nid2O88322 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nid2O88322 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nid2O88322 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nid2O88322 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nid2O88322 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.15■□□□□ 0.98
Nid2O88322 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC21.15■□□□□ 0.98
Nid2O88322 Gm17968-201ENSMUST00000194902 784 ntBASIC21.15■□□□□ 0.98
Nid2O88322 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC21.15■□□□□ 0.98
Nid2O88322 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nid2O88322 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nid2O88322 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nid2O88322 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nid2O88322 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nid2O88322 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Nid2O88322 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Nid2O88322 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nid2O88322 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Nid2O88322 Gm8344-201ENSMUST00000119813 856 ntBASIC21.14■□□□□ 0.98
Nid2O88322 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
Nid2O88322 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nid2O88322 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Nid2O88322 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nid2O88322 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nid2O88322 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC21.14■□□□□ 0.98
Nid2O88322 Gm44872-201ENSMUST00000207864 420 ntBASIC21.14■□□□□ 0.98
Nid2O88322 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Nid2O88322 AC147366.1-201ENSMUST00000227671 852 ntBASIC21.14■□□□□ 0.98
Nid2O88322 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nid2O88322 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nid2O88322 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nid2O88322 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nid2O88322 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Nid2O88322 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nid2O88322 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nid2O88322 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nid2O88322 Mir6956-201ENSMUST00000183598 62 ntBASIC21.13■□□□□ 0.97
Nid2O88322 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC21.13■□□□□ 0.97
Nid2O88322 Gm37171-201ENSMUST00000192636 1185 ntBASIC21.13■□□□□ 0.97
Nid2O88322 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC21.13■□□□□ 0.97
Nid2O88322 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC21.13■□□□□ 0.97
Nid2O88322 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nid2O88322 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nid2O88322 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.13■□□□□ 0.97
Nid2O88322 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nid2O88322 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nid2O88322 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC21.13■□□□□ 0.97
Nid2O88322 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nid2O88322 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.13■□□□□ 0.97
Nid2O88322 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nid2O88322 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nid2O88322 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC21.12■□□□□ 0.97
Nid2O88322 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Nid2O88322 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nid2O88322 Gm44492-201ENSMUST00000197012 141 ntBASIC21.12■□□□□ 0.97
Nid2O88322 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC21.12■□□□□ 0.97
Nid2O88322 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Nid2O88322 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.11■□□□□ 0.97
Nid2O88322 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.11■□□□□ 0.97
Nid2O88322 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Gm11185-201ENSMUST00000117732 1007 ntBASIC21.11■□□□□ 0.97
Nid2O88322 Gm13616-201ENSMUST00000120600 222 ntBASIC21.11■□□□□ 0.97
Nid2O88322 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nid2O88322 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nid2O88322 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms