Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ubr1O70481 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ubr1O70481 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Ubr1O70481 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC21.09■□□□□ 0.97
Ubr1O70481 H2af-ps-201ENSMUST00000119066 295 ntBASIC21.09■□□□□ 0.97
Ubr1O70481 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC21.09■□□□□ 0.97
Ubr1O70481 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Ubr1O70481 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC21.09■□□□□ 0.97
Ubr1O70481 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
Ubr1O70481 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.09■□□□□ 0.97
Ubr1O70481 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubr1O70481 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr1O70481 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr1O70481 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ubr1O70481 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC21.08■□□□□ 0.97
Ubr1O70481 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr1O70481 Gm27397-201ENSMUST00000184997 107 ntBASIC21.08■□□□□ 0.97
Ubr1O70481 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr1O70481 Gm9682-201ENSMUST00000197505 556 ntBASIC21.08■□□□□ 0.97
Ubr1O70481 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC21.08■□□□□ 0.97
Ubr1O70481 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ubr1O70481 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubr1O70481 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ubr1O70481 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.08■□□□□ 0.96
Ubr1O70481 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC21.08■□□□□ 0.96
Ubr1O70481 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC21.08■□□□□ 0.96
Ubr1O70481 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC21.08■□□□□ 0.96
Ubr1O70481 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ubr1O70481 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC21.07■□□□□ 0.96
Ubr1O70481 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC21.07■□□□□ 0.96
Ubr1O70481 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC21.07■□□□□ 0.96
Ubr1O70481 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.07■□□□□ 0.96
Ubr1O70481 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ubr1O70481 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 Gm11185-201ENSMUST00000117732 1007 ntBASIC21.07■□□□□ 0.96
Ubr1O70481 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC21.07■□□□□ 0.96
Ubr1O70481 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 AC158538.2-201ENSMUST00000225455 906 ntBASIC21.07■□□□□ 0.96
Ubr1O70481 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC21.07■□□□□ 0.96
Ubr1O70481 Gm5648-201ENSMUST00000122244 1587 ntBASIC21.07■□□□□ 0.96
Ubr1O70481 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubr1O70481 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ubr1O70481 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr1O70481 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC21.06■□□□□ 0.96
Ubr1O70481 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ubr1O70481 Mir8117-201ENSMUST00000184773 107 ntBASIC21.06■□□□□ 0.96
Ubr1O70481 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr1O70481 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr1O70481 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr1O70481 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubr1O70481 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC21.05■□□□□ 0.96
Ubr1O70481 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC21.05■□□□□ 0.96
Ubr1O70481 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.05■□□□□ 0.96
Ubr1O70481 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC21.05■□□□□ 0.96
Ubr1O70481 Gm4899-201ENSMUST00000178708 719 ntBASIC21.05■□□□□ 0.96
Ubr1O70481 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC21.05■□□□□ 0.96
Ubr1O70481 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC21.05■□□□□ 0.96
Ubr1O70481 Chchd1-203ENSMUST00000224633 557 ntBASIC21.05■□□□□ 0.96
Ubr1O70481 AC124549.3-201ENSMUST00000225541 367 ntBASIC21.05■□□□□ 0.96
Ubr1O70481 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubr1O70481 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ubr1O70481 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr1O70481 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr1O70481 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr1O70481 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubr1O70481 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms