Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.92■□□□□ 0.78
Mmp8O70138 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.92■□□□□ 0.78
Mmp8O70138 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Gm13312-201ENSMUST00000119631 718 ntBASIC19.92■□□□□ 0.78
Mmp8O70138 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.92■□□□□ 0.78
Mmp8O70138 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.92■□□□□ 0.78
Mmp8O70138 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Mmp8O70138 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Mmp8O70138 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Mmp8O70138 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp8O70138 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Mmp8O70138 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Mmp8O70138 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp8O70138 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp8O70138 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp8O70138 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Mmp8O70138 Gm14859-201ENSMUST00000117752 357 ntBASIC19.91■□□□□ 0.78
Mmp8O70138 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.91■□□□□ 0.78
Mmp8O70138 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp8O70138 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp8O70138 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.91■□□□□ 0.78
Mmp8O70138 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp8O70138 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp8O70138 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.91■□□□□ 0.78
Mmp8O70138 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp8O70138 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp8O70138 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp8O70138 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.91■□□□□ 0.78
Mmp8O70138 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Mmp8O70138 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Mmp8O70138 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Mmp8O70138 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.9■□□□□ 0.78
Mmp8O70138 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.9■□□□□ 0.78
Mmp8O70138 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.9■□□□□ 0.78
Mmp8O70138 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.9■□□□□ 0.78
Mmp8O70138 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp8O70138 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Mmp8O70138 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Mmp8O70138 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Mmp8O70138 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.89■□□□□ 0.77
Mmp8O70138 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.89■□□□□ 0.77
Mmp8O70138 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.89■□□□□ 0.77
Mmp8O70138 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp8O70138 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Mmp8O70138 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Mir3081-201ENSMUST00000175305 84 ntBASIC19.88■□□□□ 0.77
Mmp8O70138 Gm21362-201ENSMUST00000194272 928 ntBASIC19.88■□□□□ 0.77
Mmp8O70138 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.88■□□□□ 0.77
Mmp8O70138 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Mmp8O70138 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp8O70138 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp8O70138 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp8O70138 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Mmp8O70138 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp8O70138 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms