Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.45■□□□□ 0.38
ChkbO55229 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.45■□□□□ 0.38
ChkbO55229 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.45■□□□□ 0.38
ChkbO55229 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.45■□□□□ 0.38
ChkbO55229 Gm4974-201ENSMUST00000209974 875 ntBASIC17.45■□□□□ 0.38
ChkbO55229 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ChkbO55229 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ChkbO55229 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ChkbO55229 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.45■□□□□ 0.38
ChkbO55229 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkbO55229 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
ChkbO55229 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ChkbO55229 Gm10517-202ENSMUST00000192970 758 ntBASIC17.44■□□□□ 0.38
ChkbO55229 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.44■□□□□ 0.38
ChkbO55229 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.44■□□□□ 0.38
ChkbO55229 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.44■□□□□ 0.38
ChkbO55229 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
ChkbO55229 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ChkbO55229 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ChkbO55229 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.43■□□□□ 0.38
ChkbO55229 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ChkbO55229 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
ChkbO55229 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.43■□□□□ 0.38
ChkbO55229 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.43■□□□□ 0.38
ChkbO55229 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.43■□□□□ 0.38
ChkbO55229 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.43■□□□□ 0.38
ChkbO55229 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.43■□□□□ 0.38
ChkbO55229 Timm23-208ENSMUST00000226683 750 ntBASIC17.43■□□□□ 0.38
ChkbO55229 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ChkbO55229 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.43■□□□□ 0.38
ChkbO55229 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ChkbO55229 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ChkbO55229 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ChkbO55229 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.42■□□□□ 0.38
ChkbO55229 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.42■□□□□ 0.38
ChkbO55229 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ChkbO55229 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.42■□□□□ 0.38
ChkbO55229 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.42■□□□□ 0.38
ChkbO55229 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.42■□□□□ 0.38
ChkbO55229 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.42■□□□□ 0.38
ChkbO55229 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ChkbO55229 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms