Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Kcnu1O54982 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Kcnu1O54982 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.41■□□□□ 0.38
Kcnu1O54982 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Kcnu1O54982 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Kcnu1O54982 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.41■□□□□ 0.38
Kcnu1O54982 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Kcnu1O54982 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Kcnu1O54982 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Kcnu1O54982 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.41■□□□□ 0.38
Kcnu1O54982 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.41■□□□□ 0.38
Kcnu1O54982 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Kcnu1O54982 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Kcnu1O54982 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Kcnu1O54982 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Kcnu1O54982 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.4■□□□□ 0.38
Kcnu1O54982 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Kcnu1O54982 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.4■□□□□ 0.38
Kcnu1O54982 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.4■□□□□ 0.38
Kcnu1O54982 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Kcnu1O54982 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.4■□□□□ 0.38
Kcnu1O54982 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Kcnu1O54982 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.4■□□□□ 0.38
Kcnu1O54982 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Kcnu1O54982 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.4■□□□□ 0.38
Kcnu1O54982 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.4■□□□□ 0.38
Kcnu1O54982 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Kcnu1O54982 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Kcnu1O54982 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Kcnu1O54982 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Kcnu1O54982 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Kcnu1O54982 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Kcnu1O54982 Gm6433-201ENSMUST00000118634 875 ntBASIC17.39■□□□□ 0.37
Kcnu1O54982 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.39■□□□□ 0.37
Kcnu1O54982 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Kcnu1O54982 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Kcnu1O54982 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Kcnu1O54982 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Kcnu1O54982 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.39■□□□□ 0.37
Kcnu1O54982 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.38■□□□□ 0.37
Kcnu1O54982 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.38■□□□□ 0.37
Kcnu1O54982 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.38■□□□□ 0.37
Kcnu1O54982 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.38■□□□□ 0.37
Kcnu1O54982 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.38■□□□□ 0.37
Kcnu1O54982 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.38■□□□□ 0.37
Kcnu1O54982 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Kcnu1O54982 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Kcnu1O54982 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcnu1O54982 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Kcnu1O54982 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Kcnu1O54982 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Kcnu1O54982 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms