Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Limk2O54785 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Limk2O54785 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.55■□□□□ 0.24
Limk2O54785 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.55■□□□□ 0.24
Limk2O54785 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.55■□□□□ 0.24
Limk2O54785 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.55■□□□□ 0.24
Limk2O54785 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Limk2O54785 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Limk2O54785 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Limk2O54785 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Limk2O54785 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Limk2O54785 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.55■□□□□ 0.24
Limk2O54785 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Limk2O54785 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Limk2O54785 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Limk2O54785 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Limk2O54785 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.54■□□□□ 0.24
Limk2O54785 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.54■□□□□ 0.24
Limk2O54785 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.54■□□□□ 0.24
Limk2O54785 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.54■□□□□ 0.24
Limk2O54785 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.54■□□□□ 0.24
Limk2O54785 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Limk2O54785 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Limk2O54785 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.53■□□□□ 0.24
Limk2O54785 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Limk2O54785 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Limk2O54785 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.53■□□□□ 0.24
Limk2O54785 Olfr129-201ENSMUST00000122318 993 ntBASIC16.53■□□□□ 0.24
Limk2O54785 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Limk2O54785 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Limk2O54785 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.53■□□□□ 0.24
Limk2O54785 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Limk2O54785 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Limk2O54785 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.53■□□□□ 0.24
Limk2O54785 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Limk2O54785 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Limk2O54785 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Limk2O54785 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Limk2O54785 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Limk2O54785 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Limk2O54785 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Limk2O54785 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Limk2O54785 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Limk2O54785 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Limk2O54785 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.52■□□□□ 0.24
Limk2O54785 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.52■□□□□ 0.24
Limk2O54785 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Limk2O54785 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Limk2O54785 Gm34391-201ENSMUST00000203706 907 ntBASIC16.52■□□□□ 0.24
Limk2O54785 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Limk2O54785 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Limk2O54785 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.52■□□□□ 0.23
Limk2O54785 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Limk2O54785 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Limk2O54785 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Limk2O54785 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.52■□□□□ 0.23
Limk2O54785 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Limk2O54785 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms