Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.56■□□□□ 0.4
Nr1i3O35627 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.56■□□□□ 0.4
Nr1i3O35627 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nr1i3O35627 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.56■□□□□ 0.4
Nr1i3O35627 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1i3O35627 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nr1i3O35627 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.55■□□□□ 0.4
Nr1i3O35627 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Nr1i3O35627 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nr1i3O35627 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.55■□□□□ 0.4
Nr1i3O35627 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.55■□□□□ 0.4
Nr1i3O35627 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nr1i3O35627 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Nr1i3O35627 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nr1i3O35627 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nr1i3O35627 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nr1i3O35627 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.55■□□□□ 0.4
Nr1i3O35627 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1i3O35627 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.54■□□□□ 0.4
Nr1i3O35627 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Nr1i3O35627 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.54■□□□□ 0.4
Nr1i3O35627 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.54■□□□□ 0.4
Nr1i3O35627 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nr1i3O35627 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.54■□□□□ 0.4
Nr1i3O35627 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nr1i3O35627 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nr1i3O35627 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Gm45058-201ENSMUST00000205810 766 ntBASIC17.53■□□□□ 0.4
Nr1i3O35627 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.53■□□□□ 0.4
Nr1i3O35627 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nr1i3O35627 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.53■□□□□ 0.4
Nr1i3O35627 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Nr1i3O35627 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nr1i3O35627 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.52■□□□□ 0.4
Nr1i3O35627 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.52■□□□□ 0.4
Nr1i3O35627 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nr1i3O35627 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Nr1i3O35627 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.52■□□□□ 0.4
Nr1i3O35627 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.52■□□□□ 0.4
Nr1i3O35627 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Mir5130-201ENSMUST00000175160 84 ntBASIC17.52■□□□□ 0.4
Nr1i3O35627 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nr1i3O35627 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms