Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.29■□□□□ 0.04
Abca4O35600 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.29■□□□□ 0.04
Abca4O35600 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.29■□□□□ 0.04
Abca4O35600 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Abca4O35600 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.29■□□□□ 0.04
Abca4O35600 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Abca4O35600 Gm27989-201ENSMUST00000184721 107 ntBASIC15.29■□□□□ 0.04
Abca4O35600 Gm37153-201ENSMUST00000193637 231 ntBASIC15.29■□□□□ 0.04
Abca4O35600 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.29■□□□□ 0.04
Abca4O35600 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Abca4O35600 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca4O35600 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Abca4O35600 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Abca4O35600 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.28■□□□□ 0.04
Abca4O35600 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca4O35600 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Abca4O35600 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Abca4O35600 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.28■□□□□ 0.04
Abca4O35600 Gm7488-201ENSMUST00000117148 684 ntBASIC15.28■□□□□ 0.04
Abca4O35600 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Abca4O35600 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca4O35600 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Abca4O35600 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.28■□□□□ 0.04
Abca4O35600 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca4O35600 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Abca4O35600 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca4O35600 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Abca4O35600 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.27■□□□□ 0.04
Abca4O35600 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca4O35600 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca4O35600 Gm12151-201ENSMUST00000121374 290 ntBASIC15.27■□□□□ 0.04
Abca4O35600 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.27■□□□□ 0.04
Abca4O35600 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.27■□□□□ 0.04
Abca4O35600 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca4O35600 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Abca4O35600 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca4O35600 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca4O35600 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Abca4O35600 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Abca4O35600 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.27■□□□□ 0.03
Abca4O35600 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Abca4O35600 Gm20553-201ENSMUST00000204205 844 ntBASIC15.27■□□□□ 0.03
Abca4O35600 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.27■□□□□ 0.03
Abca4O35600 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.27■□□□□ 0.03
Abca4O35600 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Abca4O35600 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Abca4O35600 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.26■□□□□ 0.03
Abca4O35600 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Abca4O35600 Mir1938-201ENSMUST00000158746 100 ntBASIC15.26■□□□□ 0.03
Abca4O35600 Gm38294-201ENSMUST00000192831 381 ntBASIC15.26■□□□□ 0.03
Abca4O35600 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.26■□□□□ 0.03
Abca4O35600 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Abca4O35600 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Abca4O35600 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Abca4O35600 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 BC021767-201ENSMUST00000126387 1716 ntBASIC15.26■□□□□ 0.03
Abca4O35600 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.26■□□□□ 0.03
Abca4O35600 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Abca4O35600 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Abca4O35600 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca4O35600 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca4O35600 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Abca4O35600 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca4O35600 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Abca4O35600 Gm25287-201ENSMUST00000103846 110 ntBASIC15.25■□□□□ 0.03
Abca4O35600 Gm22918-201ENSMUST00000103855 110 ntBASIC15.25■□□□□ 0.03
Abca4O35600 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Abca4O35600 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Abca4O35600 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.25■□□□□ 0.03
Abca4O35600 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms