Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Tnfrsf11aO35305 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Tnfrsf11aO35305 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf11aO35305 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf11aO35305 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf11aO35305 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf11aO35305 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.6■□□□□ 0.41
Tnfrsf11aO35305 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf11aO35305 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf11aO35305 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf11aO35305 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Tnfrsf11aO35305 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf11aO35305 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Tnfrsf11aO35305 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf11aO35305 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf11aO35305 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Gm33142-201ENSMUST00000193913 867 ntBASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Gm45328-201ENSMUST00000210942 917 ntBASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf11aO35305 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Gm27704-201ENSMUST00000185094 107 ntBASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Gm44430-201ENSMUST00000203376 995 ntBASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Tnfrsf11aO35305 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Gm10052-201ENSMUST00000168019 960 ntBASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Gm7729-201ENSMUST00000050143 801 ntBASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf11aO35305 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Tnfrsf11aO35305 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms