Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cpsf2O35218 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cpsf2O35218 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cpsf2O35218 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.48■□□□□ 0.39
Cpsf2O35218 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.48■□□□□ 0.39
Cpsf2O35218 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.48■□□□□ 0.39
Cpsf2O35218 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.48■□□□□ 0.39
Cpsf2O35218 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.48■□□□□ 0.39
Cpsf2O35218 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cpsf2O35218 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cpsf2O35218 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf2O35218 Phf7-203ENSMUST00000226565 1971 ntBASIC17.48■□□□□ 0.39
Cpsf2O35218 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cpsf2O35218 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Gm27463-201ENSMUST00000183569 57 ntBASIC17.47■□□□□ 0.39
Cpsf2O35218 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.47■□□□□ 0.39
Cpsf2O35218 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cpsf2O35218 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cpsf2O35218 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.46■□□□□ 0.39
Cpsf2O35218 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.46■□□□□ 0.39
Cpsf2O35218 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cpsf2O35218 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cpsf2O35218 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cpsf2O35218 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cpsf2O35218 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Cpsf2O35218 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cpsf2O35218 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.45■□□□□ 0.38
Cpsf2O35218 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.45■□□□□ 0.38
Cpsf2O35218 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Cpsf2O35218 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Cpsf2O35218 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.45■□□□□ 0.38
Cpsf2O35218 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.45■□□□□ 0.38
Cpsf2O35218 Gm5417-201ENSMUST00000079706 384 ntBASIC17.45■□□□□ 0.38
Cpsf2O35218 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpsf2O35218 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Cpsf2O35218 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cpsf2O35218 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Gm13186-201ENSMUST00000118031 316 ntBASIC17.44■□□□□ 0.38
Cpsf2O35218 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Cpsf2O35218 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms