Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Hdac1O09106 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hdac1O09106 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hdac1O09106 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac1O09106 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hdac1O09106 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.45■□□□□ 0.7
Hdac1O09106 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Hdac1O09106 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.45■□□□□ 0.7
Hdac1O09106 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 Gm27463-201ENSMUST00000183569 57 ntBASIC19.45■□□□□ 0.7
Hdac1O09106 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hdac1O09106 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Hdac1O09106 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac1O09106 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Hdac1O09106 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Hdac1O09106 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hdac1O09106 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Hdac1O09106 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hdac1O09106 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hdac1O09106 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac1O09106 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hdac1O09106 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.43■□□□□ 0.7
Hdac1O09106 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.43■□□□□ 0.7
Hdac1O09106 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.43■□□□□ 0.7
Hdac1O09106 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.43■□□□□ 0.7
Hdac1O09106 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hdac1O09106 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Hdac1O09106 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac1O09106 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Hdac1O09106 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hdac1O09106 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Hdac1O09106 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.42■□□□□ 0.7
Hdac1O09106 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.42■□□□□ 0.7
Hdac1O09106 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.42■□□□□ 0.7
Hdac1O09106 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.42■□□□□ 0.7
Hdac1O09106 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.42■□□□□ 0.7
Hdac1O09106 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.42■□□□□ 0.7
Hdac1O09106 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Hdac1O09106 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hdac1O09106 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hdac1O09106 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.41■□□□□ 0.7
Hdac1O09106 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac1O09106 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac1O09106 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac1O09106 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac1O09106 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac1O09106 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac1O09106 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac1O09106 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hdac1O09106 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.41■□□□□ 0.7
Hdac1O09106 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms