Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
B020004C17RikJ3QP07 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
B020004C17RikJ3QP07 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Gm37153-201ENSMUST00000193637 231 ntBASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
B020004C17RikJ3QP07 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Gm15920-201ENSMUST00000118998 402 ntBASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Chchd1-203ENSMUST00000224633 557 ntBASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.17■□□□□ 0.5
B020004C17RikJ3QP07 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Gm8344-201ENSMUST00000119813 856 ntBASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
B020004C17RikJ3QP07 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
B020004C17RikJ3QP07 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms