Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ccdc180J3QNE4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Ccdc180J3QNE4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ccdc180J3QNE4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC29.58■■■□□ 2.33
Ccdc180J3QNE4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Ccdc180J3QNE4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ccdc180J3QNE4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC29.58■■■□□ 2.33
Ccdc180J3QNE4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Ccdc180J3QNE4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Ccdc180J3QNE4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
Ccdc180J3QNE4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Ccdc180J3QNE4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
Ccdc180J3QNE4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC29.56■■■□□ 2.32
Ccdc180J3QNE4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ccdc180J3QNE4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC29.56■■■□□ 2.32
Ccdc180J3QNE4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Ccdc180J3QNE4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ccdc180J3QNE4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ccdc180J3QNE4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ccdc180J3QNE4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ccdc180J3QNE4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC29.54■■■□□ 2.32
Ccdc180J3QNE4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 AC154572.2-201ENSMUST00000225105 997 ntBASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
Ccdc180J3QNE4 Gm5648-201ENSMUST00000122244 1587 ntBASIC29.52■■■□□ 2.32
Ccdc180J3QNE4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ccdc180J3QNE4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC29.52■■■□□ 2.32
Ccdc180J3QNE4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Ccdc180J3QNE4 H2af-ps-201ENSMUST00000119066 295 ntBASIC29.52■■■□□ 2.32
Ccdc180J3QNE4 AC151286.1-201ENSMUST00000198489 145 ntBASIC29.52■■■□□ 2.32
Ccdc180J3QNE4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Ccdc180J3QNE4 Gm18622-201ENSMUST00000219361 595 ntBASIC29.52■■■□□ 2.32
Ccdc180J3QNE4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Ccdc180J3QNE4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC29.51■■■□□ 2.32
Ccdc180J3QNE4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Ccdc180J3QNE4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Ccdc180J3QNE4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ccdc180J3QNE4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Ccdc180J3QNE4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC29.51■■■□□ 2.31
Ccdc180J3QNE4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC29.51■■■□□ 2.31
Ccdc180J3QNE4 AC159295.1-201ENSMUST00000225326 940 ntBASIC29.51■■■□□ 2.31
Ccdc180J3QNE4 Gm15500-202ENSMUST00000071641 1019 ntBASIC29.51■■■□□ 2.31
Ccdc180J3QNE4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ccdc180J3QNE4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC29.51■■■□□ 2.31
Ccdc180J3QNE4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ccdc180J3QNE4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Gm27300-201ENSMUST00000184085 97 ntBASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Gm27335-201ENSMUST00000184758 97 ntBASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms