Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sgo2bJ3QMK1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sgo2bJ3QMK1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.28■□□□□ 0.2
Sgo2bJ3QMK1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Gm9987-201ENSMUST00000069768 567 ntBASIC16.27■□□□□ 0.2
Sgo2bJ3QMK1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Sgo2bJ3QMK1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Sgo2bJ3QMK1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sgo2bJ3QMK1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sgo2bJ3QMK1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms