Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC24.63■■□□□ 1.53
Pcf11G3X9Z4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcf11G3X9Z4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcf11G3X9Z4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcf11G3X9Z4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcf11G3X9Z4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm4609-201ENSMUST00000106443 1002 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm5138-201ENSMUST00000113842 1002 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm15191-201ENSMUST00000117933 1000 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm12182-201ENSMUST00000118655 1008 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm13882-201ENSMUST00000120886 1002 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm14822-201ENSMUST00000122247 291 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm10284-201ENSMUST00000145057 1005 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm10481-201ENSMUST00000179228 1002 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm2574-201ENSMUST00000181051 1002 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm3200-201ENSMUST00000181493 1002 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm8825-201ENSMUST00000182565 998 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm4518-201ENSMUST00000182638 718 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm8330-201ENSMUST00000182754 1008 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm4575-201ENSMUST00000182991 1002 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm8709-201ENSMUST00000183230 1012 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm10293-201ENSMUST00000076317 1002 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm6316-201ENSMUST00000082064 1020 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gm11873-201ENSMUST00000117877 1304 ntBASIC24.62■■□□□ 1.53
Pcf11G3X9Z4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Gm6257-201ENSMUST00000163864 910 ntBASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Pcf11G3X9Z4 Gm15635-204ENSMUST00000208024 2539 ntBASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcf11G3X9Z4 AC225888.1-201ENSMUST00000227184 728 ntBASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC24.59■■□□□ 1.53
Pcf11G3X9Z4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcf11G3X9Z4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcf11G3X9Z4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Pcf11G3X9Z4 Gm23935-201ENSMUST00000102303 57 ntBASIC24.58■■□□□ 1.52
Pcf11G3X9Z4 Gm24270-201ENSMUST00000102326 57 ntBASIC24.58■■□□□ 1.52
Pcf11G3X9Z4 Gm24245-201ENSMUST00000157318 57 ntBASIC24.58■■□□□ 1.52
Pcf11G3X9Z4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.52
Pcf11G3X9Z4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC24.58■■□□□ 1.52
Pcf11G3X9Z4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC24.58■■□□□ 1.52
Pcf11G3X9Z4 Gm7229-201ENSMUST00000214719 1007 ntBASIC24.58■■□□□ 1.52
Pcf11G3X9Z4 AC158538.2-201ENSMUST00000225455 906 ntBASIC24.58■■□□□ 1.52
Pcf11G3X9Z4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC24.58■■□□□ 1.52
Pcf11G3X9Z4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Pcf11G3X9Z4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcf11G3X9Z4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcf11G3X9Z4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcf11G3X9Z4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Pcf11G3X9Z4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcf11G3X9Z4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcf11G3X9Z4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcf11G3X9Z4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC24.57■■□□□ 1.52
Pcf11G3X9Z4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC24.56■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms