Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc85cE9Q6B2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ccdc85cE9Q6B2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc85cE9Q6B2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc85cE9Q6B2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc85cE9Q6B2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Gm43125-201ENSMUST00000201724 730 ntBASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc85cE9Q6B2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Gm18889-201ENSMUST00000174284 929 ntBASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ccdc85cE9Q6B2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Gm27430-201ENSMUST00000184585 107 ntBASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Gm44333-201ENSMUST00000197168 107 ntBASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc85cE9Q6B2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms