Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shank1D3YZU1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.59□□□□□ -0.07
Shank1D3YZU1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.59□□□□□ -0.07
Shank1D3YZU1 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.59□□□□□ -0.07
Shank1D3YZU1 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.59□□□□□ -0.07
Shank1D3YZU1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shank1D3YZU1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Shank1D3YZU1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shank1D3YZU1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shank1D3YZU1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Shank1D3YZU1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.58□□□□□ -0.07
Shank1D3YZU1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shank1D3YZU1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.58□□□□□ -0.07
Shank1D3YZU1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shank1D3YZU1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Shank1D3YZU1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.57□□□□□ -0.08
Shank1D3YZU1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Gm11780-201ENSMUST00000136880 516 ntBASIC14.57□□□□□ -0.08
Shank1D3YZU1 Mir3113-201ENSMUST00000175478 76 ntBASIC14.57□□□□□ -0.08
Shank1D3YZU1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.57□□□□□ -0.08
Shank1D3YZU1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Shank1D3YZU1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Shank1D3YZU1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Shank1D3YZU1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shank1D3YZU1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shank1D3YZU1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shank1D3YZU1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shank1D3YZU1 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.56□□□□□ -0.08
Shank1D3YZU1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shank1D3YZU1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.56□□□□□ -0.08
Shank1D3YZU1 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.56□□□□□ -0.08
Shank1D3YZU1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shank1D3YZU1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Shank1D3YZU1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shank1D3YZU1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms