Protein–RNA interactions for Protein: B3F5L4

5830411N06Rik, RIKEN cDNA 5830411N06 gene, mousemouse

Predictions only

Length 1,112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5830411N06RikB3F5L4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.71■□□□□ 0.27
5830411N06RikB3F5L4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.71■□□□□ 0.27
5830411N06RikB3F5L4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
5830411N06RikB3F5L4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
5830411N06RikB3F5L4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
5830411N06RikB3F5L4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
5830411N06RikB3F5L4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
5830411N06RikB3F5L4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
5830411N06RikB3F5L4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
5830411N06RikB3F5L4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Gm27741-201ENSMUST00000185060 237 ntBASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
5830411N06RikB3F5L4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
5830411N06RikB3F5L4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
5830411N06RikB3F5L4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Gm25406-201ENSMUST00000157599 105 ntBASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Gm25745-201ENSMUST00000174945 133 ntBASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
5830411N06RikB3F5L4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms