Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chd3B1AR17 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
Chd3B1AR17 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.95■□□□□ 0.14
Chd3B1AR17 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.95■□□□□ 0.14
Chd3B1AR17 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chd3B1AR17 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chd3B1AR17 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chd3B1AR17 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chd3B1AR17 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chd3B1AR17 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chd3B1AR17 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chd3B1AR17 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chd3B1AR17 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Chd3B1AR17 Gm4459-201ENSMUST00000118750 468 ntBASIC15.95■□□□□ 0.14
Chd3B1AR17 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Chd3B1AR17 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
Chd3B1AR17 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
Chd3B1AR17 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.95■□□□□ 0.14
Chd3B1AR17 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Chd3B1AR17 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.94■□□□□ 0.14
Chd3B1AR17 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chd3B1AR17 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.93■□□□□ 0.14
Chd3B1AR17 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Chd3B1AR17 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.93■□□□□ 0.14
Chd3B1AR17 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.93■□□□□ 0.14
Chd3B1AR17 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Chd3B1AR17 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Chd3B1AR17 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Chd3B1AR17 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.93■□□□□ 0.14
Chd3B1AR17 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Chd3B1AR17 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.93■□□□□ 0.14
Chd3B1AR17 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.93■□□□□ 0.14
Chd3B1AR17 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.93■□□□□ 0.14
Chd3B1AR17 Gm6376-201ENSMUST00000209407 580 ntBASIC15.93■□□□□ 0.14
Chd3B1AR17 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Chd3B1AR17 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chd3B1AR17 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Chd3B1AR17 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Chd3B1AR17 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Chd3B1AR17 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Chd3B1AR17 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Gm9172-201ENSMUST00000212092 954 ntBASIC15.91■□□□□ 0.14
Chd3B1AR17 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Chd3B1AR17 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chd3B1AR17 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms