Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm8825-201ENSMUST00000182565 998 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm4518-201ENSMUST00000182638 718 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.14■□□□□ 0.49
Scn3aA2ASI5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Scn3aA2ASI5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.13■□□□□ 0.49
Scn3aA2ASI5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.13■□□□□ 0.49
Scn3aA2ASI5 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn3aA2ASI5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn3aA2ASI5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.11■□□□□ 0.49
Scn3aA2ASI5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn3aA2ASI5 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Gm14140-201ENSMUST00000119999 995 ntBASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Gm6257-201ENSMUST00000163864 910 ntBASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn3aA2ASI5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms