Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC8.59□□□□□ -1.03
Ubr4A2AN08 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ubr4A2AN08 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC8.59□□□□□ -1.03
Ubr4A2AN08 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC8.59□□□□□ -1.03
Ubr4A2AN08 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Ubr4A2AN08 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Ubr4A2AN08 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Ubr4A2AN08 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Ubr4A2AN08 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC8.59□□□□□ -1.03
Ubr4A2AN08 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Ubr4A2AN08 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Ubr4A2AN08 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Gm7488-201ENSMUST00000117148 684 ntBASIC8.58□□□□□ -1.04
Ubr4A2AN08 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Gm2308-201ENSMUST00000166539 1004 ntBASIC8.58□□□□□ -1.04
Ubr4A2AN08 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Gm15743-202ENSMUST00000182690 1901 ntBASIC8.58□□□□□ -1.04
Ubr4A2AN08 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Gm37277-201ENSMUST00000194052 1111 ntBASIC8.58□□□□□ -1.04
Ubr4A2AN08 Gm45841-201ENSMUST00000207700 164 ntBASIC8.58□□□□□ -1.04
Ubr4A2AN08 Gm6888-201ENSMUST00000221983 706 ntBASIC8.58□□□□□ -1.04
Ubr4A2AN08 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Gm12859-201ENSMUST00000117834 427 ntBASIC8.58□□□□□ -1.04
Ubr4A2AN08 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC8.58□□□□□ -1.04
Ubr4A2AN08 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Ubr4A2AN08 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ubr4A2AN08 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ubr4A2AN08 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Gm24694-201ENSMUST00000180054 110 ntBASIC8.57□□□□□ -1.04
Ubr4A2AN08 Gm27663-201ENSMUST00000184839 110 ntBASIC8.57□□□□□ -1.04
Ubr4A2AN08 AC124751.1-201ENSMUST00000222716 1408 ntBASIC8.57□□□□□ -1.04
Ubr4A2AN08 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Ubr4A2AN08 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Gm7507-201ENSMUST00000183053 1008 ntBASIC8.56□□□□□ -1.04
Ubr4A2AN08 Gm38294-201ENSMUST00000192831 381 ntBASIC8.56□□□□□ -1.04
Ubr4A2AN08 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Gm38318-201ENSMUST00000195769 1706 ntBASIC8.56□□□□□ -1.04
Ubr4A2AN08 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Hsf1-207ENSMUST00000228371 2102 ntBASIC8.56□□□□□ -1.04
Ubr4A2AN08 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms