Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Shroom2A2ALU4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Shroom2A2ALU4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Gm11185-201ENSMUST00000117732 1007 ntBASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Gm18062-201ENSMUST00000208020 547 ntBASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Gm18055-201ENSMUST00000208254 547 ntBASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Gm7787-201ENSMUST00000216858 688 ntBASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Grk6-206ENSMUST00000224995 2971 ntBASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
Shroom2A2ALU4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Gm15743-202ENSMUST00000182690 1901 ntBASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Shroom2A2ALU4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Gm43630-201ENSMUST00000201550 776 ntBASIC25.66■■□□□ 1.7
Shroom2A2ALU4 AC131710.1-201ENSMUST00000228336 990 ntBASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Shroom2A2ALU4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Shroom2A2ALU4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Shroom2A2ALU4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Shroom2A2ALU4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Shroom2A2ALU4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC25.64■■□□□ 1.7
Shroom2A2ALU4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC25.64■■□□□ 1.69
Shroom2A2ALU4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Shroom2A2ALU4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
Shroom2A2ALU4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Shroom2A2ALU4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC25.63■■□□□ 1.69
Shroom2A2ALU4 AC153962.4-201ENSMUST00000217878 242 ntBASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Gm5779-201ENSMUST00000218467 910 ntBASIC25.63■■□□□ 1.69
Shroom2A2ALU4 AC117588.1-201ENSMUST00000228510 999 ntBASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shroom2A2ALU4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Shroom2A2ALU4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 AC149294.4-201ENSMUST00000227870 882 ntBASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Gm15163-201ENSMUST00000120749 1302 ntBASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Shroom2A2ALU4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Shroom2A2ALU4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms