Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IsxA1A546 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IsxA1A546 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
IsxA1A546 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.23■□□□□ 0.03
IsxA1A546 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
IsxA1A546 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.22■□□□□ 0.03
IsxA1A546 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IsxA1A546 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IsxA1A546 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IsxA1A546 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
IsxA1A546 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.22■□□□□ 0.03
IsxA1A546 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.22■□□□□ 0.03
IsxA1A546 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
IsxA1A546 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.22■□□□□ 0.03
IsxA1A546 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
IsxA1A546 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.22■□□□□ 0.03
IsxA1A546 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.22■□□□□ 0.03
IsxA1A546 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.22■□□□□ 0.03
IsxA1A546 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IsxA1A546 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.22■□□□□ 0.03
IsxA1A546 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IsxA1A546 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IsxA1A546 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
IsxA1A546 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Gm2399-201ENSMUST00000104944 225 ntBASIC15.21■□□□□ 0.03
IsxA1A546 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
IsxA1A546 Gm11643-201ENSMUST00000119578 864 ntBASIC15.21■□□□□ 0.03
IsxA1A546 Gm20760-201ENSMUST00000179197 648 ntBASIC15.21■□□□□ 0.03
IsxA1A546 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.21■□□□□ 0.03
IsxA1A546 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.21■□□□□ 0.03
IsxA1A546 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IsxA1A546 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.21■□□□□ 0.02
IsxA1A546 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.21■□□□□ 0.02
IsxA1A546 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IsxA1A546 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
IsxA1A546 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IsxA1A546 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
IsxA1A546 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
IsxA1A546 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.2■□□□□ 0.02
IsxA1A546 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.2■□□□□ 0.02
IsxA1A546 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.2■□□□□ 0.02
IsxA1A546 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.2■□□□□ 0.02
IsxA1A546 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.2■□□□□ 0.02
IsxA1A546 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
IsxA1A546 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms