Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Gm715-201ENSMUST00000117865 831 ntBASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Gm27463-201ENSMUST00000183569 57 ntBASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Gm21814-202ENSMUST00000203277 873 ntBASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav12-1A0N8R1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav12-1A0N8R1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Trav12-1A0N8R1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav12-1A0N8R1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Gm15039-201ENSMUST00000118914 875 ntBASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav12-1A0N8R1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Gm11539-201ENSMUST00000119837 557 ntBASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Gm44450-201ENSMUST00000199528 114 ntBASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms