Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav12d-1A0N8R0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12d-1A0N8R0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Gm12527-201ENSMUST00000117967 564 ntBASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Prob1-201ENSMUST00000097619 3021 ntBASIC13.15□□□□□ -0.3
Trav12d-1A0N8R0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.15□□□□□ -0.31
Trav12d-1A0N8R0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav12d-1A0N8R0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Gm13186-201ENSMUST00000118031 316 ntBASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12d-1A0N8R0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms