Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav12-2A0N8N6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav12-2A0N8N6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12-2A0N8N6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12-2A0N8N6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms