Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhgb8A0A140LI48 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm12085-201ENSMUST00000119263 940 ntBASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhgb8A0A140LI48 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhgb8A0A140LI48 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pcdhgb8A0A140LI48 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Gm13401-201ENSMUST00000117074 291 ntBASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Gm7889-201ENSMUST00000185591 958 ntBASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhgb8A0A140LI48 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms