Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm9172-201ENSMUST00000212092 954 ntBASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Rps4l-201ENSMUST00000071745 943 ntBASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Gm12497-201ENSMUST00000138778 237 ntBASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Igkv5-43A0A0B4J1J2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Igkv5-43A0A0B4J1J2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm4459-201ENSMUST00000118750 468 ntBASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm11452-201ENSMUST00000122376 690 ntBASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms