Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trbc1A0A0A6YWV4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trbc1A0A0A6YWV4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.02□□□□□ -0.01
Trbc1A0A0A6YWV4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trbc1A0A0A6YWV4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm33142-201ENSMUST00000193913 867 ntBASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm44450-201ENSMUST00000199528 114 ntBASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbc1A0A0A6YWV4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm29518-201ENSMUST00000190858 372 ntBASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbc1A0A0A6YWV4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Mir770-201ENSMUST00000103252 94 ntBASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm11950-201ENSMUST00000121615 838 ntBASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm6623-201ENSMUST00000173570 544 ntBASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm29707-201ENSMUST00000196325 491 ntBASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm17808-201ENSMUST00000200859 894 ntBASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms