Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Gm30025-201ENSMUST00000218555 728 ntBASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav21-dv12A0A075B6C4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav21-dv12A0A075B6C4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav21-dv12A0A075B6C4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav21-dv12A0A075B6C4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav21-dv12A0A075B6C4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav21-dv12A0A075B6C4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm37055-201ENSMUST00000191866 133 ntBASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms