Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm6576-201ENSMUST00000169678 883 ntBASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav6n-6A0A075B6B2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6n-6A0A075B6B2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm43183-201ENSMUST00000200632 547 ntBASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav6n-6A0A075B6B2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm10698-201ENSMUST00000182663 604 ntBASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6n-6A0A075B6B2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms