Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav17A0A075B655 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav17A0A075B655 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav17A0A075B655 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.01□□□□□ -0.33
Trav17A0A075B655 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav17A0A075B655 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.01□□□□□ -0.33
Trav17A0A075B655 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.01□□□□□ -0.33
Trav17A0A075B655 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav17A0A075B655 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav17A0A075B655 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13□□□□□ -0.33
Trav17A0A075B655 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13□□□□□ -0.33
Trav17A0A075B655 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13□□□□□ -0.33
Trav17A0A075B655 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13□□□□□ -0.33
Trav17A0A075B655 H2-K2-201ENSMUST00000174250 1049 ntBASIC13□□□□□ -0.33
Trav17A0A075B655 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13□□□□□ -0.33
Trav17A0A075B655 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trav17A0A075B655 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav17A0A075B655 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Gm10602-201ENSMUST00000098239 609 ntBASIC12.99□□□□□ -0.33
Trav17A0A075B655 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav17A0A075B655 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms